99 skin WSI (whole slide images): 49 abnormal cases and 50 normal benign.

Keywords: Pathology, Skin, Cancer, Whole slide imaging, Annotated.

Sample images

Sample images with reduced image quality. Please click to preview.

Dataset information

Cite as Karin Lindman, Jerónimo F. Rose, Martin Lindvall, and Caroline Bivik Stadler (2019) Skin data from the Visual Sweden project DROID doi:10.23698/aida/drsk
Field Pathology
Organ Skin
Age span 20-93 years
Title Skin data from the Visual Sweden project DROID
Author Karin Lindman
Jerónimo F. Rose
Martin Lindvall
Caroline Bivik Stadler
Year 2019
DOI doi:10.23698/aida/drsk
Status Completed
Version 1.0
Scans 99
Annotations 16509
Size 32GB
Resolution 20X single plane
Modality Scanscope AT (Aperio, US)
NanoZoomer XR (Hamamatsu, Japan)
NanoZoomer XRL (Hamamatsu, Japan)
Stain H&E (hematoxylin and eosin)
Phase
References
Access
constraints
Restricted access
Copyright Copyright 2019 Linköping University, Claes Lundström
Download Please contact Karin Lindman, Claes Lundstrom, or Joel Hedlund to request access.

Annotation

One physician was responsible for the manual annotations controlled by a second pathologist. Accurate annotations were made over the whole tissues. 16509 separate annotations were made.

The following findings were annotated in the abnormal cases: actinic keratosis, basal cell carcinoma, dermatofibroma, dysplastic nevus, intradermal nevus, keratoachantoma, lentigo malignant melanoma, malignant melanoma, malignant melanoma in situ, scar, seborrheic keratosis, squamous cell carcinoma and squamous cell carcinoma in situ. Other areas annotated: abnormal, acanthosis, artifacts, dermis, epidermis, fibrosis, fibrin body, granuloma, inflammation, inflammatory edema, normal, perichondrium, reactive cellular changes, skin appendage structure, surgical margins, structure of cartilage of auditory canal, subcutaneous fatty tissue, subcutaneous tissue, surgical margins and from which body part the skin was excised.

In the normal skin cases were following structures chosen to be annotated: artifact, dermis, epidermis, normal skin, perichondrium, skin and subcutaneous structure, skin appendage structure, skin structure, structure of cartilage of auditory canal, subcutaneous fatty tissue, subcutaneous tissue and surgical margins.

License

Copyright 2019 Linköping University, Claes Lundström

Permission to use, copy, modify, and/or distribute this data within Analytic Imaging Diagnostics Arena (AIDA) for any purpose with or without fee is hereby granted, provided that the above copyright notice and this permission notice appear in all copies, and that publications resulting from the use of this data cite the following works:

Karin Lindman, Jerónimo F. Rose, Martin Lindvall, and Caroline Bivik Stadler (2019) Skin data from the Visual Sweden project DROID doi:10.23698/aida/drsk.

THE DATA IS PROVIDED “AS IS” AND THE AUTHOR DISCLAIMS ALL WARRANTIES WITH REGARD TO THIS DATA INCLUDING ALL IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR ANY SPECIAL, DIRECT, INDIRECT, OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE OR CHARACTERISTICS OF THIS DATA.